miRBase entry: mne-mir-7-1

Stem-loop mne-mir-7-1


Accession
MI0002779
Description
Macaca nemestrina mne-mir-7-1 precursor miRNA
Gene family
MIPF0000022; mir-7


Sequence

uuggauguuggccuaguucugugUGGAAGACUAGUGAUUUUGUUguuuuuagauaacuaaauugacaacaaaucacagucugccauauggcacaggccaugccucuacag
.((((.((((((((.((.((((((((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).)))))))).)))))))).)).))))...

Structure
--u    u  -      a  u        A     A       U      --     a 
   ugga gu uggccu gu cugugUGG AGACU GUGAUUU GUUguu  uuuag u
   |||| || |||||| || |||||||| ||||| ||||||| ||||||  |||||  
   aucu cg accgga ca gguauacc ucuga cacuaaa caacag  aaauc a
gac    c  u      -  c        g     -       -      uu     a 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature mne-miR-7

Accession MIMAT0002483
Description Macaca nemestrina mne-miR-7 mature miRNA
Sequence 24 - UGGAAGACUAGUGAUUUUGUU - 44
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24