Stem-loop ppa-mir-7-2

Accession

MI0002784

Description

Pan paniscus ppa-mir-7-2 precursor miRNA

Gene family

MIPF0000022; mir-7

Sequence

cuggauacagagcggaccggcuggccccaucUGGAAGACUAGUGAUUUUGUUguugucuuacugcgcucaacaacaaaucccagucuaccuaauggugccagccaucaca
(((....)))........(((((((.((((..((.(((((.(.(((((.(((((((............))))))))))))).))))).))..)))).)))))))......

Structure

cuggauacagagcggacc       c    cU  A     A U     U       ucuua 
                  ggcuggc ccau  GG AGACU G GAUUU GUUguug     c
                  ||||||| ||||  || ||||| | ||||| |||||||      
                  ccgaccg ggua  cc ucuga c cuaaa caacaac     u
------------acacua       u    au  a     c -     -       ucgcg 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr15: 86509119-86509228 [+]

Mature ppa-miR-7

• Accession: MIMAT0002484
• Description: Pan paniscus ppa-miR-7 mature miRNA
• Sequence: 32 - UGGAAGACUAGUGAUUUUGUU - 52
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24