miRBase entry: age-mir-34a

Stem-loop age-mir-34a


Accession
MI0002797
Description
Ateles geoffroyi age-mir-34a precursor miRNA
Gene family
MIPF0000039; mir-34


Sequence

ggccagcugugaguguuucuuUGGCAGUGUCUUAGCUGGUUGUugugugcaauagugaaggaagcaaucagcaaguauacugcccuagaagugcugcacguuguggggccc
((((.(((((((((((((((..(((((((((((.((((((((((.....((....)).....))))))))))))).))))))))..))))))))).))))..))..)))).

Structure
-    -a  --    -         uU        -   A          gugug  a 
 ggcc  gc  ugug aguguuucu  GGCAGUGU CUU GCUGGUUGUu     ca u
 ||||  ||  |||| |||||||||  |||||||| ||| ||||||||||     ||  
 ccgg  ug  gcac ucgugaaga  ccgucaua gaa cgacuaacga     gu a
c    gg  uu    g         uc        u   -          aggaa  g 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature age-miR-34a

Accession MIMAT0002495
Description Ateles geoffroyi age-miR-34a mature miRNA
Sequence 22 - UGGCAGUGUCUUAGCUGGUUGU - 43
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24