miRBase entry: mml-mir-181a-2

Stem-loop mml-mir-181a-2


Accession
MI0002808
Description
Macaca mulatta mml-mir-181a-2 precursor miRNA
Gene family
MIPF0000007; mir-181

Literature search
3 open access papers mention mml-mir-181a-2
(33 sentences)

Sequence

2017018 reads, 12759 reads per million, 9 experiments
agaagggcuaucaggccagccuucagaggacuccaaggAACAUUCAACGCUGUCGGUGAGUuugggauuugaaaaaaccacugaccguugacuguaccucgggguccuua
.((((((((....)))...))))).(((((((((.(((.(((.((((((..(((((((.((((...........))))))))))))))))).))).))).))))))))).

Structure
agaagggcuaucaggccagccuuca         a   A   U      CU       A    ggga 
                         gaggacucc agg ACA UCAACG  GUCGGUG GUuu    u
                         ||||||||| ||| ||| ||||||  ||||||| ||||    u
                         uuccugggg ucc ugu aguugc  cagucac caaa    u
------------------------a         c   a   c      --       -    aaag 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [2]. The expression of this mature miRNA was validated by Miska et al [1].

Genome context
chr15: 14342713-14342822 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-mir-181a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-181a-5p

Accession MIMAT0002506
Description Macaca mulatta mml-miR-181a-5p mature miRNA
Sequence 39 - AACAUUCAACGCUGUCGGUGAGU - 61
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 15345052
    Microarray analysis of microRNA expression in the developing mammalian brain
    Miska EA, Alvarez-Saavedra E, Townsend M, Yoshii A, Sestan N, Rakic P, Constantine-Paton M, Horvitz HR
    Genome Biol (2004) 5:R68

  2. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24