Stem-loop sequence ppy-mir-182

Accession MI0002816
Description Pongo pygmaeus miR-182 stem-loop
Gene family MIPF0000116; mir-182
Stem-loop 
caca    -  --ug    c      uu       u -g      uca      ugaggu 
    gcug cu    ccuu ccccgu  uuggcaa g  uagaac   cacugg      a
    |||| ||    |||| ||||||  ||||||| |  ||||||   ||||||       
    cggc ga    ggag ggggua  aaccguu c  aucuug   guggcc      a
--ca    c  cuca    c      uc       - ag      ---      uaggac
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Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Coordinates (PPYG2) Overlapping transcripts
7: 126686148-126686259 [-]
intergenic
Clustered miRNAs
< 10kb from ppy-mir-182
ppy-mir-183 7: 126690908-126691014 [-]
ppy-mir-96 7: 126690695-126690772 [-]
ppy-mir-182 7: 126686148-126686259 [-]
Database links

Mature sequence ppy-miR-182

Accession MIMAT0002514
Sequence

25 -  

uuuggcaaugguagaacucaca

 - 46

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Evidence by similarity; MI0000272
Predicted targets

References

1
PMID:15652478 "Phylogenetic shadowing and computational identification of human microRNA genes" Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E Cell. 120:21-24(2005).