miRBase entry: sla-mir-204

Stem-loop sla-mir-204


Accession
MI0002841
Description
Saguinus labiatus sla-mir-204 precursor miRNA
Gene family
MIPF0000042; mir-204


Sequence

ggcuacagucuuucuucaugugacucguggacUUCCCUUUGUCAUCCUAUGCCUgagaauauaugaaggaggcugggaaggcaaagggacguucaauugucaucacuggc
.....((((..........(((((...(((((.((((((((((.(((((.((((...............))))))))).)))))))))).)))))...))))).))))..

Structure
ggcua    cuuucuucau     ucg     U          A     U    gagaau 
     cagu          gugac   uggac UCCCUUUGUC UCCUA GCCU      a
     ||||          |||||   ||||| |||||||||| ||||| ||||      u
     guca          uacug   acuug agggaaacgg agggu cgga      a
---cg    ---------c     uua     c          a     -    ggaagu 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature sla-miR-204

Accession MIMAT0002538
Description Saguinus labiatus sla-miR-204 mature miRNA
Sequence 33 - UUCCCUUUGUCAUCCUAUGCCU - 54
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24