Stem-loop mne-mir-218-1

Accession

MI0002876

Description

Macaca nemestrina mne-mir-218-1 precursor miRNA

Gene family

MIPF0000026; mir-218

Sequence

gugacaauguagcgagauuuucugUUGUGCUUGAUCUAACCAUGUgguugcgagguaugaguaaaacaugguuccgucaagcaccauggaacgucacgcagcuuucuaca
(((.....((.(((.(((.((((((.(((((((((..((((((((..((((.........)))).))))))))..))))))))).)))))).))).))).))....))).

Structure

-   acaau  a   a   u      U         CU        gg    gag 
 gug     gu gcg gau uucugU GUGCUUGAU  AACCAUGU  uugc   g
 |||     || ||| ||| |||||| |||||||||  ||||||||  ||||   u
 cau     cg cgc cug aaggua cacgaacug  uugguaca  aaug   a
a   -cuuu  a   a   c      c         cc        -a    agu 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature mne-miR-218

• Accession: MIMAT0002573
• Description: Macaca nemestrina mne-miR-218 mature miRNA
• Sequence: 25 - UUGUGCUUGAUCUAACCAUGU - 45
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24