Stem-loop sla-mir-198

Accession

MI0002920

Description

Saguinus labiatus sla-mir-198 precursor miRNA

Gene family

MIPF0000090; mir-198

Sequence

ucauuGGUCCAGAGGGGAGCUCGAuaccugugauuuuuccuucuuuucuguagaauaaauga
(((((..((((((((((((...((.............)).))))))))))..))...)))))

Structure

     -GG  --          CUC  uaccu 
ucauu   UC  CAGAGGGGAG   GA     g
|||||   ||  ||||||||||   ||     u
aguaa   ag  gucuuuucuu   cu     g
     aua  au          --c  uuuua 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature sla-miR-198

• Accession: MIMAT0002611
• Description: Saguinus labiatus sla-miR-198 mature miRNA
• Sequence: 6 - GGUCCAGAGGGGAGCUCGA - 24
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24