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miRBase |
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Stem-loop sequence mml-mir-181b-1 |
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Accession | MI0002932 (change log) | |||||
Previous IDs | mml-mir-181b | |||||
Description | Macaca mulatta miR-181b-1 stem-loop | |||||
Gene family | MIPF0000007; mir-181 | |||||
Literature search |
3 open access papers mention mml-mir-181b-1 | |||||
Stem-loop |
ccugugcagagauuauuuuuuaaaa aucaa cug gaa g 5' ggucaca cauucauug ucgguggguu cu u ||||||| ||||||||| |||||||||| || 3' ccggugu guaaguaac agucacucga ga g -------------------uucgcc -caac --a aca u |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Comments |
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [2]. The expression of this mature miRNA was validated by Miska et al [1]. |
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence mml-miR-181b-5p |
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Accession | MIMAT0002623 |
Sequence |
36 - aacauucauugcugucgguggguu - 59 |
Deep sequencing | 1195673 reads, 9 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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Predicted targets |
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Mature sequence mml-miR-181b-1-3p |
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Accession | MIMAT0026592 |
Sequence |
79 - acugaacaaugaaugcaac - 97 |
Deep sequencing | 1452 reads, 9 experiments |
Evidence | experimental; Illumina [3] |
Predicted targets |
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References |
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1 |
PMID:15345052
"Microarray analysis of microRNA expression in the developing mammalian brain"
Genome Biol. 5:R68(2004).
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2 |
PMID:15652478
"Phylogenetic shadowing and computational identification of human microRNA genes"
Cell. 120:21-24(2005).
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3 |
PMID:23034410
"Birth and expression evolution of mammalian microRNA genes"
Genome Res. 23:34-45(2013).
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