miRBase entry: sla-mir-16

Stem-loop sla-mir-16


Accession
MI0002952
Description
Saguinus labiatus sla-mir-16 precursor miRNA
Gene family
MIPF0000006; mir-15


Sequence

gucagcagugccuUAGCAGCACGUAAAUAUUGGCGuuaagauucuaaaauuaucuccaguauuaacugugcugcugaaguaagguugac
((((((..(((.((((((((((((.((((((((.(.(((..........))).).)))))))).)).)))))))))).)))..))))))

Structure
      ag   c          -  A        C u   gauu 
gucagc  ugc uUAGCAGCAC GU AAUAUUGG G uaa    c
||||||  ||| |||||||||| || |||||||| | |||     
caguug  aug agucgucgug ca uuaugacc c auu    u
      ga   a          u  a        u u   aaaa 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature sla-miR-16

Accession MIMAT0002645
Description Saguinus labiatus sla-miR-16 mature miRNA
Sequence 14 - UAGCAGCACGUAAAUAUUGGCG - 35
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24