Stem-loop lla-mir-16

Accession

MI0002964

Description

Lagothrix lagotricha lla-mir-16 precursor miRNA

Gene family

MIPF0000006; mir-15

Sequence

gucagcagugccuUAGCAGCACGUAAAUAUUGGCGcuaagauucuaaaauuaucuccaguauuaacugugcugcugaaguaagguuggc
((((((..(((.((((((((((((.((((((((.(.(((..........))).).)))))))).)).)))))))))).)))..))))))

Structure

      ag   c          -  A        C c   gauu 
gucagc  ugc uUAGCAGCAC GU AAUAUUGG G uaa    c
||||||  ||| |||||||||| || |||||||| | |||     
cgguug  aug agucgucgug ca uuaugacc c auu    u
      ga   a          u  a        u u   aaaa 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature lla-miR-16

• Accession: MIMAT0002657
• Description: Lagothrix lagotricha lla-miR-16 mature miRNA
• Sequence: 14 - UAGCAGCACGUAAAUAUUGGCG - 35
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24