Stem-loop lca-mir-20

Accession

MI0002974

Description

Lemur catta lca-mir-20 precursor miRNA

Gene family

MIPF0000001; mir-17

Sequence

guagcacUAAAGUGCUUAUAGUGCAGGUAguguuuaguuaucuacugcaucaugagcacuuaaaguacugc
((((.(((.((((((((((.((((((.(((...........))))))))).))))))))))..))).))))

Structure

    c   -A          A      G   uguu 
guag acU  AAGUGCUUAU GUGCAG UAg    u
|||| |||  |||||||||| |||||| |||    a
cguc uga  uucacgagua uacguc auc    g
    a   aa          c      -   uauu 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature lca-miR-20

• Accession: MIMAT0002669
• Description: Lemur catta lca-miR-20 mature miRNA
• Sequence: 8 - UAAAGUGCUUAUAGUGCAGGUA - 29
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24