Stem-loop lca-mir-23a

Accession

MI0003043

Description

Lemur catta lca-mir-23a precursor miRNA

Gene family

MIPF0000027; mir-23

Sequence

ggccggcugggguuccuggggaugggauuugcuaccuaucacaaAUCACAUUGCCAGGGAUUUCCaaccgacc
((.(((.((((((((((((.((((.((((((..........)))))).)))).))))))).))))).))).))

Structure

  c   c     -       g    g      cuac 
gg cgg ugggg uuccugg gaug gauuug    c
|| ||| ||||| ||||||| |||| ||||||     
cc gcc aCCUU AGGGACC UUAC CUAaac    u
  a   a     U       G    A      acua 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature lca-miR-23a

• Accession: MIMAT0002745
• Description: Lemur catta lca-miR-23a mature miRNA
• Sequence: 45 - AUCACAUUGCCAGGGAUUUCC - 65
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24