miRBase entry: lla-mir-106b

Stem-loop lla-mir-106b


Accession
MI0003078
Description
Lagothrix lagotricha lla-mir-106b precursor miRNA
Gene family
MIPF0000001; mir-17


Sequence

ccugccggggcUAAAGUGCUGACAGUGCAGAUaguguccucuccgugcuaccgcacuguggguacuugcugcuccagcagg
(((((.(((((..(((((((.(((((((.(.(((((.(......))))))).))))))).)))))))...))))).)))))

Structure
     c     -UA       G       A A     u cu 
ccugc ggggc   AAGUGCU ACAGUGC G Uagug c  c
||||| |||||   ||||||| ||||||| | ||||| |   
ggacg ccucg   uucaugg ugucacg c aucgu g  u
     a     ucg       g       c -     - cc 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature lla-miR-106b

Accession MIMAT0002777
Description Lagothrix lagotricha lla-miR-106b mature miRNA
Sequence 12 - UAAAGUGCUGACAGUGCAGAU - 32
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24