miRBase entry: mne-mir-183

Stem-loop mne-mir-183


Accession
MI0003092
Description
Macaca nemestrina mne-mir-183 precursor miRNA
Gene family
MIPF0000066; mir-183


Sequence

ccgcagaacgugacuccuguucugugUAUGGCACUGGUAGAAUUCACUGugaacagucucggucagugaauuaccgaagggccauaaacagagcagagacagauccacga
........((((..(((((((((((.((((((.((((((..(((((((((((......)))..))))))))))))..)).)))))).))))))))).....))..)))).

Structure
ccgcagaa    ac  -----         g      A  --    GA        --   ac 
        cgug  uc     cuguucugu UAUGGC CU  GGUA  AUUCACUG  uga  a
        ||||  ||     ||||||||| |||||| ||  ||||  ||||||||  |||   
        gcac  ag     gacgagaca auaccg ga  ccau  uaagugac  gcu  g
-------a    cu  acaga         a      g  ag    --        ug   cu 


Annotation confidence Not enough data
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature mne-miR-183

Accession MIMAT0002791
Description Macaca nemestrina mne-miR-183 mature miRNA
Sequence 27 - UAUGGCACUGGUAGAAUUCACUG - 49
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24