Stem-loop hsa-mir-520e

Accession

MI0003143

Symbol

HGNC: MIR520E

Description

Homo sapiens hsa-mir-520e precursor miRNA

Literature search

40 open access papers mention hsa-mir-520e
(97 sentences)

Sequence

10 reads, 3 reads per million, 3 experiments

ucuccugcugugaccCUCAAGAUGGAAGCAGUUUCUGuugucugaaaggaaagAAAGUGCUUCCUUUUUGAGGGuuacuguuugaga
((((..((.(((((((((((((.(((((((.(((((....(((...)))..))))).))))))).))))))))))))).))..))))

Structure

    cu  u             U       G     Guug   g 
ucuc  gc gugaccCUCAAGA GGAAGCA UUUCU    ucu  
||||  || ||||||||||||| ||||||| |||||    ||| a
agag  ug cauuGGGAGUUUU CCUUCGU AAAga    gga  
    uu  u             U       G     --aa   a 

Annotation confidence Not enough data

Genome context

chr19: 53675711-53675797 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from hsa-mir-520e

Disease association

hsa-mir-520e is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-520e-3p

• Accession: MIMAT0002825
• Description: Homo sapiens hsa-miR-520e-3p mature miRNA
• Sequence: 54 - AAAGUGCUUCCUUUUUGAGGG - 74
• Evidence: experimental ; array-cloned [1]

Mature hsa-miR-520e-5p

• Accession: MIMAT0037324
• Description: Homo sapiens hsa-miR-520e-5p mature miRNA
• Sequence: 16 - CUCAAGAUGGAAGCAGUUUCUG - 37
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 15965474
   Identification of hundreds of conserved and nonconserved human microRNAs
   "Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z"
   "Nat Genet (2005) 37:766-770


2. PubMed ID: 25822230
   Selective microRNA-Offset RNA expression in human embryonic stem cells
   Asikainen S, Heikkinen L, Juhila J, Holm F, Weltner J, Trokovic R, Mikkola M, Toivonen S, Balboa D, Lampela R, Icay K, Tuuri T, Otonkoski T, Wong G, Hovatta O
   PLoS One (2015) 10:e0116668