Stem-loop tni-mir-223

Accession

MI0003210

Description

Tetraodon nigroviridis tni-mir-223 precursor miRNA

Gene family

MIPF0000067; mir-223

Literature search

1 open access papers mention tni-mir-223
(6 sentences)

Sequence

caggcccuucacuuaguguauuugacaagcuguguuugacacucuguaucugcgagUGUCAGUUUGUCAAAUACCCCaagugagg
......((((((((.(.((((((((((((((......(((((((.((....))))))))))))))))))))))).).))))))))

Structure

caggcc        a u              guguuu       u  a 
      cuucacuu g guauuugacaagcu      gacacuc gu u
      |||||||| | ||||||||||||||      ||||||| ||  
      ggagugaa C CAUAAACUGUUUGA      CUGUgag cg c
------        C C              ------       -  u 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

Un_random: 92603284-92603368 [-]

Mature tni-miR-223

• Accession: MIMAT0002895
• Description: Tetraodon nigroviridis tni-miR-223 mature miRNA
• Sequence: 57 - UGUCAGUUUGUCAAAUACCCC - 77
• Evidence: not_experimental

References