miRBase entry: fru-let-7e

Stem-loop fru-let-7e


Accession
MI0003213
Description
Fugu rubripes fru-let-7e precursor miRNA
Gene family
MIPF0000002; let-7


Sequence

gcuguccuugggguUGAGGUAGUAGAUUGAAUAGUUgugggguugugugaccucuuagugagauaacuauacaaucuacugucuuuccuaaggagacagc
(((((((((((((..((((((((((((((.((((((((((((((....))))))........)))))))).)))))))))))))))))))))))..))))

Structure
    --         uU              A        --------      g 
gcug  uccuugggg  GAGGUAGUAGAUUG AUAGUUgu        gggguu u
||||  |||||||||  |||||||||||||| ||||||||        ||||||  
cgac  aggaauccu  uucugucaucuaac uaucaaua        cuccag g
    ag         --              a        gagugauu      u 


Annotation confidence Not enough data
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Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context
HE602537.1: 8251435-8251534 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from fru-let-7e
Name Accession Chromosome Start End Strand Confidence




Database links

Mature fru-let-7e

Accession MIMAT0002898
Description Fugu rubripes fru-let-7e mature miRNA
Sequence 15 - UGAGGUAGUAGAUUGAAUAGUU - 36
Evidence not_experimental

References