Stem-loop fru-mir-222

Accession

MI0003219

Description

Fugu rubripes fru-mir-222 precursor miRNA

Gene family

MIPF0000051; mir-221

Sequence

ucaguugcucaguaggcaguguagauccuguguagcaaucagcAGCUACAUCUGGCUACUGGGUCUCug
.(((..(((((((((.((((((((...(((.........)))...))))).))).)))))))))..)))

Structure

u   uu         g   -     auc   ugu 
 cag  gcucaguag cag uguag   cug   a
 |||  ||||||||| ||| |||||   |||   g
 guC  UGGGUCAUC GUC ACAUC   gac   c
-   UC         G   U     GAc   uaa 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602535.1: 10152431-10152499 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-mir-222

Mature fru-miR-222

• Accession: MIMAT0002904
• Description: Fugu rubripes fru-miR-222 mature miRNA
• Sequence: 44 - AGCUACAUCUGGCUACUGGGUCUC - 67
• Evidence: not_experimental

References