miRBase entry: fru-mir-221

Stem-loop fru-mir-221


Accession
MI0003221
Description
Fugu rubripes fru-mir-221 precursor miRNA
Gene family
MIPF0000051; mir-221


Sequence

ccugaaccuggcauacaauguagauuucugugugcuuggauucuacAGCUACAUUGUCUGCUGGGUUUCcggauagc
((.((((((((((.(((((((((....(((((...........)))))))))))))).))))))))))..)).....

Structure
-----  -u          u         auuu     ugcu 
     cc  gaaccuggca acaauguag    cugug    u
     ||  |||||||||| |||||||||    |||||    g
     gg  UUUGGGUCGU UGUUACAUC    GAcau    g
cgaua  cC          C         ----     cuua 


Annotation confidence Not enough data
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Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context
HE602535.1: 10152714-10152790 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from fru-mir-221
Name Accession Chromosome Start End Strand Confidence




Database links

Mature fru-miR-221

Accession MIMAT0002906
Description Fugu rubripes fru-miR-221 mature miRNA
Sequence 47 - AGCUACAUUGUCUGCUGGGUUUC - 69
Evidence not_experimental

References