Stem-loop tni-mir-142a

Accession

MI0003224

Description

Tetraodon nigroviridis tni-mir-142a precursor miRNA

Gene family

MIPF0000084; mir-142

Literature search

1 open access papers mention tni-mir-142a
(7 sentences)

Sequence

guacagugcagucaucCAUAAAGUAGAAAGCACUACUaaacucuucgccacaguguaguguuuccuacuuuauggaugaguguacuguug
..((((((((.(((((((((((((((.(((((((((..................))))))))).))))))))))))))).))))))))..

Structure

gu        g               A         Uaaacucu 
  acagugca ucaucCAUAAAGUAG AAGCACUAC        u
  |||||||| ||||||||||||||| |||||||||         
  ugucaugu aguagguauuucauc uuugugaug        c
gu        g               c         ugacaccg 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

7: 2557207-2557296 [+]

Mature tni-miR-142a

• Accession: MIMAT0002909
• Description: Tetraodon nigroviridis tni-miR-142a mature miRNA
• Sequence: 17 - CAUAAAGUAGAAAGCACUACU - 37
• Evidence: not_experimental

References