Stem-loop tni-mir-19a

Accession

MI0003236

Description

Tetraodon nigroviridis tni-mir-19a precursor miRNA

Gene family

MIPF0000011; mir-19

Sequence

gcaguucucugcuaguuuugcauaguugcacuacaagaauagaggaguUGUGCAAAUCUAUGCAAAACUGAugguggccug
((((....))))(((((((((((((((((((.((............)).))))))..)))))))))))))...........

Structure

gcaguucucugc             --      u  aagaa 
            uaguuuugcauag  uugcac ac     u
            |||||||||||||  |||||| ||      
            GUCAAAACGUAUC  AACGUG ug     a
-guccggugguA             UA      U  aggag 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

5: 8188589-8188669 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from tni-mir-19a

Mature tni-miR-19a

• Accession: MIMAT0002921
• Description: Tetraodon nigroviridis tni-miR-19a mature miRNA
• Sequence: 49 - UGUGCAAAUCUAUGCAAAACUGA - 71
• Evidence: not_experimental

References