Stem-loop tni-mir-19b

Accession

MI0003238

Description

Tetraodon nigroviridis tni-mir-19b precursor miRNA

Gene family

MIPF0000011; mir-19

Sequence

caaucaucguuuggucaguuuugcugguuugcauucagcuuuguugcugugcUGUGCAAAUCCAUGCAAAACUGAcu
............((((((((((((((((((((((.((((......))))....))))))).))).))))))))))))

Structure

caaucaucguuu            -   -       ---u    uu 
            ggucaguuuugc ugg uuugcau    cagc  u
            |||||||||||| ||| |||||||    ||||   
            ucAGUCAAAACG ACC AAACGUG    gucg  g
------------            U   U       Ucgu    uu 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

5: 8188259-8188335 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from tni-mir-19b

Mature tni-miR-19b

• Accession: MIMAT0002923
• Description: Tetraodon nigroviridis tni-miR-19b mature miRNA
• Sequence: 53 - UGUGCAAAUCCAUGCAAAACUGA - 75
• Evidence: not_experimental

References