Stem-loop fru-mir-489

Accession

MI0003254

Description

Fugu rubripes fru-mir-489 precursor miRNA

Gene family

MIPF0000111; mir-489

Sequence

cuucugauacuggugguggcuugguggucguaugcaugacgucauuuacuucgaugauuggAGUGACAUCAUAUGUACGGCUGCuaaacugcuacaagagac
.........((.(((((((.((((((((((((((.((((.(((((((...((...))...))))))).)))).)))))))))))))).))))))).))....

Structure

cuucugaua  g       c              c    c       acu  g 
         cu guggugg uugguggucguaug auga gucauuu   uc  
         || ||||||| |||||||||||||| |||| |||||||   || a
         ga caucguc aauCGUCGGCAUGU UACU CAGUGAg   ag  
-----caga  a       a              A    A       guu  u 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602546.1: 8921764-8921865 [+]

Mature fru-miR-489

• Accession: MIMAT0002938
• Description: Fugu rubripes fru-miR-489 mature miRNA
• Sequence: 62 - AGUGACAUCAUAUGUACGGCUGC - 84
• Evidence: not_experimental

References