Stem-loop tni-mir-489

Accession

MI0003255

Description

Tetraodon nigroviridis tni-mir-489 precursor miRNA

Gene family

MIPF0000111; mir-489

Sequence

uggugguggccugguggucguaugcaugacgucauuuacuucgaugauuggAGUGACAUCAUAUGUACGGCUGCuaaaccgcuacaagagac
..(((((((..(((((((((((((.((((.(((((((...((...))...))))))).)))).)))))))))))))..))))))).......

Structure

-----ug       cc             c    c       acu  g 
       guggugg  ugguggucguaug auga gucauuu   uc  
       |||||||  ||||||||||||| |||| |||||||   || a
       caucgcc  auCGUCGGCAUGU UACU CAGUGAg   ag  
cagagaa       aa             A    A       guu  u 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

21_random: 1370439-1370530 [+]

Mature tni-miR-489

• Accession: MIMAT0002939
• Description: Tetraodon nigroviridis tni-miR-489 mature miRNA
• Sequence: 52 - AGUGACAUCAUAUGUACGGCUGC - 74
• Evidence: not_experimental

References