miRBase entry: fru-mir-194

Stem-loop fru-mir-194


Accession
MI0003259
Description
Fugu rubripes fru-mir-194 precursor miRNA
Gene family
MIPF0000055; mir-194


Sequence

cgcuggaUGUAACAGCAACUCCAUGUGGaagcuguaugugaguuccaguggaagugcuguuaccugcagaga
..(((.(.(((((((((..(((((.(((((.((.......))))))))))))..))))))))).).)))...

Structure
-cg   g U         AC     G     g  gu 
   cug a GUAACAGCA  UCCAU UGGaa cu  a
   ||| | |||||||||  ||||| ||||| ||  u
   gac u cauugucgu  aggug accuu ga  g
aga   g c         ga     -     -  gu 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context
HE602549.1: 7517908-7517979 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from fru-mir-194
Name Accession Chromosome Start End Strand Confidence




Database links

Mature fru-miR-194

Accession MIMAT0002943
Description Fugu rubripes fru-miR-194 mature miRNA
Sequence 8 - UGUAACAGCAACUCCAUGUGG - 28
Evidence not_experimental

References