miRBase entry: tni-mir-142b

Stem-loop tni-mir-142b


Accession
MI0003262
Description
Tetraodon nigroviridis tni-mir-142b precursor miRNA
Gene family
MIPF0000084; mir-142

Literature search
1 open access papers mention tni-mir-142b
(7 sentences)

Sequence

acagugcugucaccCAUAAAGUAGAAAGCACUACUAaacgucuuuacacaguguaguguuuccuacuuuauggaugagugcacugu
(((((((..(((.(((((((((((.(((((((((..................))))))))).))))))))))).)))..)))))))

Structure
       ug   c           A         UAaacguc 
acagugc  uca cCAUAAAGUAG AAGCACUAC        u
|||||||  ||| ||||||||||| |||||||||         
ugucacg  agu gguauuucauc uuugugaug        u
       ug   a           c         ugacacau 


Annotation confidence Not enough data
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Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context
16: 3999086-3999171 [+]

Database links

Mature tni-miR-142b

Accession MIMAT0002946
Description Tetraodon nigroviridis tni-miR-142b mature miRNA
Sequence 15 - CAUAAAGUAGAAAGCACUACUA - 36
Evidence not_experimental

References