Stem-loop fru-mir-30d

Accession

MI0003265

Description

Fugu rubripes fru-mir-30d precursor miRNA

Gene family

MIPF0000005; mir-30

Sequence

ugcacauggcaguuugaggcUGUAAACAUCCCCGACUGGAAGcugucacucagaagagcuuucagucugauguuuaccaccuccgaccgccuccugcu
.(((...(((.(((.((((..(((((((((...(((((((((((.((.....))..))))))))))).)))))))))..)))).))).)))...))).

Structure

u   cau   a   u    cU         CCC           -g  a 
 gca   ggc guu gagg  GUAAACAUC   GACUGGAAGcu  uc c
 |||   ||| ||| ||||  |||||||||   |||||||||||  || u
 cgu   ccg cag cucc  cauuuguag   cugacuuucga  ag c
u   ccu   c   c    ac         --u           ga  a 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602546.1: 5585808-5585905 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-mir-30d

Mature fru-miR-30d

• Accession: MIMAT0002949
• Description: Fugu rubripes fru-miR-30d mature miRNA
• Sequence: 21 - UGUAAACAUCCCCGACUGGAAG - 42
• Evidence: not_experimental

References