Stem-loop tni-mir-30d

Accession

MI0003266

Description

Tetraodon nigroviridis tni-mir-30d precursor miRNA

Gene family

MIPF0000005; mir-30

Sequence

uggcaguuugaggcUGUAAACAUCCCCGACUGGAAGcugucacucagcagagcuuucagucugauguuuacccccuccgaccgccu
.(((.(((.((((..(((((((((...(((((((((((.(........).))))))))))).)))))))))..)))).))).))).

Structure

u   a   u    cU         CCC           g cac 
 ggc guu gagg  GUAAACAUC   GACUGGAAGcu u   u
 ||| ||| ||||  |||||||||   ||||||||||| |    
 ccg cag cucc  cauuuguag   cugacuuucga a   c
u   c   c    cc         --u           g cga 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

21: 5298825-5298910 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tni-mir-30d

Mature tni-miR-30d

• Accession: MIMAT0002950
• Description: Tetraodon nigroviridis tni-miR-30d mature miRNA
• Sequence: 15 - UGUAAACAUCCCCGACUGGAAG - 36
• Evidence: not_experimental

References