Stem-loop tni-mir-196a-2

Accession

MI0003272

Description

Tetraodon nigroviridis tni-mir-196a-2 precursor miRNA

Gene family

MIPF0000031; mir-196

Sequence

ucgagugguuUAGGUAGUUUCAUGUUGUUGGGguccauuucaaacucugcaacaugaaacugucuuaauugcccca
....((((((.(((((((((((((((((.(((............))).))))))))))))))))).))))))....

Structure

ucga      U                 U   gucca 
    gugguu AGGUAGUUUCAUGUUGU GGG     u
    |||||| ||||||||||||||||| |||      
    cguuaa ucugucaaaguacaacg cuc     u
accc      u                 u   aaacu 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

21: 3025748-3025823 [+]

Mature tni-miR-196a

• Accession: MIMAT0002956
• Description: Tetraodon nigroviridis tni-miR-196a mature miRNA
• Sequence: 11 - UAGGUAGUUUCAUGUUGUUGGG - 32
• Evidence: not_experimental

References