Stem-loop fru-mir-199-3

Accession

MI0003275

Description

Fugu rubripes fru-mir-199-3 precursor miRNA

Gene family

MIPF0000040; mir-199

Sequence

cuccccguccugccugCCCAGUGUUCAGACUACCUGUUCaucagacuaaagcugaacaguagucugcacauugguuaagcuggguugggacacacacgc
.((((..(((.((.((.(((((((.((((((((.((((((.(........).)))))))))))))).))))))).)).)).)))..)))).........

Structure

--------c    cg   u  c  C       U        C      u aga 
         uccc  ucc gc ug CCAGUGU CAGACUAC UGUUCa c   c
         ||||  ||| || || ||||||| |||||||| |||||| |    
         aggg  ggg cg au gguuaca gucugaug acaagu g   u
cgcacacac    uu   u  a  u       c        -      c aaa 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602539.1: 8191687-8191785 [-]

Mature fru-miR-199

• Accession: MIMAT0002959
• Description: Fugu rubripes fru-miR-199 mature miRNA
• Sequence: 17 - CCCAGUGUUCAGACUACCUGUUC - 39
• Evidence: not_experimental

References