Stem-loop tni-mir-199-3

Accession

MI0003276

Description

Tetraodon nigroviridis tni-mir-199-3 precursor miRNA

Gene family

MIPF0000040; mir-199

Sequence

ccccacccugccugCCCAGUGUUCAGACUACCUGUUCaucagacucaagcugaacaguagucugcacauugguuaugcagaguugggacacacac
.((((.(((((.((.(((((((.((((((((.((((((.(........).)))))))))))))).))))))).)).)))).).))))........

Structure

-------c    c -    c  C       U        C      u aga 
        ccca c cugc ug CCAGUGU CAGACUAC UGUUCa c   c
        |||| | |||| || ||||||| |||||||| |||||| |    
        gggu g gacg au gguuaca gucugaug acaagu g   u
cacacaca    u a    u  u       c        -      c aac 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

3: 11403050-11403144 [-]

Mature tni-miR-199

• Accession: MIMAT0002960
• Description: Tetraodon nigroviridis tni-miR-199 mature miRNA
• Sequence: 15 - CCCAGUGUUCAGACUACCUGUUC - 37
• Evidence: not_experimental

References