miRBase entry: tni-mir-365

Stem-loop tni-mir-365


Accession
MI0003284
Description
Tetraodon nigroviridis tni-mir-365 precursor miRNA
Gene family
MIPF0000061; mir-365


Sequence

cagcaagaaaagugagggacuuuuaggggcagcuguguuuuauuaacccagucaUAAUGCCCCUAAAAAUCCUUAUugcucuugcaauuguc
..((((((..((((((((..(((((((((((((((.(((.....))).)))).....))))))))))).))))))))..)))))).......

Structure
-----ca      aa        ac           -----    u   u 
       gcaaga  agugaggg  uuuuaggggca     gcug guu u
       ||||||  ||||||||  |||||||||||     |||| ||| a
       cguucu  uUAUUCCU  AAAAUCCCCGU     ugac caa u
cuguuaa      cg        -A           AAUac    c   u 


Annotation confidence Not enough data
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Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context
Un_random: 38921278-38921369 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from tni-mir-365
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tni-miR-365

Accession MIMAT0002968
Description Tetraodon nigroviridis tni-miR-365 mature miRNA
Sequence 55 - UAAUGCCCCUAAAAAUCCUUAU - 76
Evidence not_experimental

References