Stem-loop fru-mir-193

Accession

MI0003285

Description

Fugu rubripes fru-mir-193 precursor miRNA

Gene family

MIPF0000082; mir-193

Sequence

ugugucagaagcugggucuuugcgggcaaggugaguccucaguuuguucAACUGGCCUACAAAGUCCCAGUcucuggcucacguaacc
((.((((((.((((((.(((((.((((.(((.....)))(((((.....))))))))).))))).)))))).)))))).)).......

Structure

-------  u      a      u     c    aaggugaguccu     u 
       ug gucaga gcuggg cuuug gggc            caguu g
       || |||||| |||||| ||||| ||||            ||||| u
       ac cggucu UGACCC GAAAC UCCG            GUCAA u
ccaaugc  u      c      U     A    ------------     c 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602551.1: 1288135-1288222 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-mir-193

Mature fru-miR-193

• Accession: MIMAT0002969
• Description: Fugu rubripes fru-miR-193 mature miRNA
• Sequence: 50 - AACUGGCCUACAAAGUCCCAGU - 71
• Evidence: not_experimental

References