Stem-loop tni-mir-193

Accession

MI0003286

Description

Tetraodon nigroviridis tni-mir-193 precursor miRNA

Gene family

MIPF0000082; mir-193

Sequence

cagaagcugggucuuugcgggcaaggugaguccucaguuuguucAACUGGCCUACAAAGUCCCAGUgucuggcucacgugacc
((((.((((((.(((((.((((.(((.....)))(((((.....))))))))).))))).)))))).))))............

Structure

------------    a      u     c    aaggugaguccu     u 
            caga gcuggg cuuug gggc            caguu g
            |||| |||||| ||||| ||||            ||||| u
            gucu UGACCC GAAAC UCCG            GUCAA u
ccagugcacucg    g      U     A    ------------     c 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

Un_random: 38919577-38919659 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tni-mir-193

Mature tni-miR-193

• Accession: MIMAT0002970
• Description: Tetraodon nigroviridis tni-miR-193 mature miRNA
• Sequence: 45 - AACUGGCCUACAAAGUCCCAGU - 66
• Evidence: not_experimental

References