Stem-loop fru-mir-217

Accession

MI0003289

Description

Fugu rubripes fru-mir-217 precursor miRNA

Gene family

MIPF0000077; mir-217

Sequence

augaagagccuucuugaugcggaugaUACUGCAUCAGGAACUGAUUGGcugaugcuuuuuacccaacaguaccugaugcauugccuucagcauugaaaga
..((((...))))(((((((.((.(.((.(((((((((.((((.((((.(((......))).)))))))).))))))))).)).).)).)))))))....

Structure

augaagagccuuc       g  u a  C         A    A    c   ug 
             uugaugc ga g UA UGCAUCAGG ACUG UUGG uga  c
             ||||||| || | || ||||||||| |||| |||| |||   
             aguuacg cu c gu acguagucc ugac aacc auu  u
---------agaa       a  u c  u         a    -    c   uu 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602538.1: 10290639-10290738 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from fru-mir-217

Mature fru-miR-217

• Accession: MIMAT0002971
• Description: Fugu rubripes fru-miR-217 mature miRNA
• Sequence: 27 - UACUGCAUCAGGAACUGAUUGG - 48
• Evidence: not_experimental

References