miRBase entry: tni-mir-217

Stem-loop tni-mir-217


Accession
MI0003290
Description
Tetraodon nigroviridis tni-mir-217 precursor miRNA
Gene family
MIPF0000077; mir-217


Sequence

ucuugauguggaugaUACUGCAUCAGGAACUGAUUGGcugaugcuuaguacccaacaguaccugaugcauugccuucagcauugaaaga
..(((((((.((.(.((.(((((((((.((((.((((((((...))))...)))))))).))))))))).)).).)).)))))))....

Structure
--uc       g  u a  C         A    A    ---    u 
    uugaugu ga g UA UGCAUCAGG ACUG UUGG   cuga  
    ||||||| || | || ||||||||| |||| ||||   |||| g
    aguuacg cu c gu acguagucc ugac aacc   gauu  
agaa       a  u c  u         a    -    cau    c 


Annotation confidence Not enough data
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Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context
17: 5748304-5748392 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from tni-mir-217
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tni-miR-217

Accession MIMAT0002972
Description Tetraodon nigroviridis tni-miR-217 mature miRNA
Sequence 16 - UACUGCAUCAGGAACUGAUUGG - 37
Evidence not_experimental

References