Stem-loop fru-mir-216a

Accession

MI0003291

Description

Fugu rubripes fru-mir-216a precursor miRNA

Gene family

MIPF0000054; mir-216

Sequence

uugguaAAAUCUCAGCUGGCAACUGUGAgucguucacuagcugcucucacaauggccucugggauuaugcuaa
.(((((.((((((((..(((...((((((..((.........)).))))))...))).)))))))).))))).

Structure

u     A        CU   AAC      uc  uca 
 uggua AAUCUCAG  GGC   UGUGAg  gu   c
 ||||| ||||||||  |||   ||||||  ||   u
 aucgu uuaggguc  ccg   acacuc  cg   a
a     a        -u   gua      -u  ucg 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602538.1: 10291197-10291269 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from fru-mir-216a

Mature fru-miR-216a

• Accession: MIMAT0002973
• Description: Fugu rubripes fru-miR-216a mature miRNA
• Sequence: 7 - AAAUCUCAGCUGGCAACUGUGA - 28
• Evidence: not_experimental

References