miRBase entry: fru-mir-216b

Stem-loop fru-mir-216b


Accession
MI0003293
Description
Fugu rubripes fru-mir-216b precursor miRNA
Gene family
MIPF0000054; mir-216


Sequence

ugacuguuUAAUCUCUGCAGGCAACUGUGAugguguuuuauauucucacaaucaccuggagagauucugcaguuuau
.((((((..(((((((.((((....(((((.(((((...))))).)))))....)))).)))))))..))))))...

Structure
--u      uU       G    CAAC     u     u 
   gacugu  AAUCUCU CAGG    UGUGA ggugu  
   ||||||  ||||||| ||||    ||||| ||||| u
   uugacg  uuagaga gucc    acacu uuaua  
uau      uc       g    acua     c     u 


Annotation confidence Not enough data
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Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context
HE602538.1: 10291881-10291957 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from fru-mir-216b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature fru-miR-216b

Accession MIMAT0002975
Description Fugu rubripes fru-miR-216b mature miRNA
Sequence 9 - UAAUCUCUGCAGGCAACUGUGA - 30
Evidence not_experimental

References