Stem-loop tni-mir-216b

Accession

MI0003294

Description

Tetraodon nigroviridis tni-mir-216b precursor miRNA

Gene family

MIPF0000054; mir-216

Sequence

ugacuguuUAAUCUCUGCAGGCAACUGUGAuggugauuuuuauucucacaaucaccuggagagauucugcaguuuau
.((((((..(((((((.((((....(((((.(((((...))))).)))))....)))).)))))))..))))))...

Structure

--u      uU       G    CAAC     u     u 
   gacugu  AAUCUCU CAGG    UGUGA gguga  
   ||||||  ||||||| ||||    ||||| ||||| u
   uugacg  uuagaga gucc    acacu uuauu  
uau      uc       g    acua     c     u 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

17: 5747086-5747162 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from tni-mir-216b

Mature tni-miR-216b

• Accession: MIMAT0002976
• Description: Tetraodon nigroviridis tni-miR-216b mature miRNA
• Sequence: 9 - UAAUCUCUGCAGGCAACUGUGA - 30
• Evidence: not_experimental

References