Stem-loop fru-mir-218b

Accession

MI0003307

Description

Fugu rubripes fru-mir-218b precursor miRNA

Gene family

MIPF0000026; mir-218

Sequence

caggaccccaUUGUGCUUGAUCUAACCAUGCAgugcaucguguguccaugguugugccaagcaccuuggaggcuug
((((.(((((..(((((((...((((((((....((((...)))).))))))))...)))))))..))).))))))

Structure

    a  -   UU       AUC        CAgu    c 
cagg cc cca  GUGCUUG   UAACCAUG    gcau  
|||| || |||  |||||||   ||||||||    |||| g
guuc gg ggu  cacgaac   guugguac    ugug  
    -  a   uc       cgu        ---c    u 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602540.1: 8551434-8551509 [-]

Mature fru-miR-218b

• Accession: MIMAT0002985
• Description: Fugu rubripes fru-miR-218b mature miRNA
• Sequence: 11 - UUGUGCUUGAUCUAACCAUGCA - 32
• Evidence: not_experimental

References