Stem-loop fru-mir-301

Accession

MI0003309

Description

Fugu rubripes fru-mir-301 precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

cagcugcuuugacaauguugcacuacuguaccauccauucuagCAGUGCAAUAGUAUUGUCAUAGcau
....((((.(((((((((((((((.(((............))).))))))))...))))))).)))).

Structure

cagc    u       ---        a   uacca 
    ugcu ugacaau   guugcacu cug     u
    |||| |||||||   |||||||| |||      
    acGA ACUGUUA   UAACGUGA gau     c
---u    U       UGA        C   cuuac 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602540.1: 8594035-8594102 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-mir-301

Mature fru-miR-301

• Accession: MIMAT0002987
• Description: Fugu rubripes fru-miR-301 mature miRNA
• Sequence: 44 - CAGUGCAAUAGUAUUGUCAUAG - 65
• Evidence: not_experimental

References