Stem-loop tni-mir-301

Accession

MI0003310

Description

Tetraodon nigroviridis tni-mir-301 precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

aggucagcugcucugacaauguugcacuacuguaccauccauucuagCAGUGCAAUAGUAUUGUCAUAGcauuuggccu
(((((((.((((.(((((((((((((((.(((............))).))))))))...))))))).)))).)))))))

Structure

       c    c       ---        a   uacca 
aggucag ugcu ugacaau   guugcacu cug     u
||||||| |||| |||||||   |||||||| |||      
uccgguu acGA ACUGUUA   UAACGUGA gau     c
       u    U       UGA        C   cuuac 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

4: 1516052-1516130 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tni-mir-301

Mature tni-miR-301

• Accession: MIMAT0002988
• Description: Tetraodon nigroviridis tni-miR-301 mature miRNA
• Sequence: 48 - CAGUGCAAUAGUAUUGUCAUAG - 69
• Evidence: not_experimental

References