miRBase entry: fru-mir-218a-1

Stem-loop fru-mir-218a-1


Accession
MI0003317
Description
Fugu rubripes fru-mir-218a-1 precursor miRNA
Gene family
MIPF0000026; mir-218


Sequence

cggcugucucUUGUGCUUGAUCUAACCAUGUGgccccgccuauugugacaucacaugguuccgucaagcgccagggaccgcug
((((.((((((.(((((((((..((((((((((...(((.....)))...))))))))))..))))))))).)))))).))))

Structure
    u      U         CU          ccc   c 
cggc gucucU GUGCUUGAU  AACCAUGUGg   cgc u
|||| |||||| |||||||||  ||||||||||   ||| a
gucg caggga cgcgaacug  uugguacacu   gug u
    c      c         cc          aca   u 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context
HE602548.1: 9887318-9887400 [-]

Database links

Mature fru-miR-218a

Accession MIMAT0002993
Description Fugu rubripes fru-miR-218a mature miRNA
Sequence 11 - UUGUGCUUGAUCUAACCAUGUG - 32
Evidence not_experimental

References