Stem-loop tni-mir-218a-1

Accession

MI0003318

Description

Tetraodon nigroviridis tni-mir-218a-1 precursor miRNA

Gene family

MIPF0000026; mir-218

Sequence

cggcugucucUUGUGCUUGAUCUAACCAUGUGgccccgccuauugugaaaucacaugguuccgucaagcgccagggaccgcug
((((.((((((.(((((((((..((((((((((...(((.....)))...))))))))))..))))))))).)))))).))))

Structure

    u      U         CU          ccc   c 
cggc gucucU GUGCUUGAU  AACCAUGUGg   cgc u
|||| |||||| |||||||||  ||||||||||   ||| a
gucg caggga cgcgaacug  uugguacacu   gug u
    c      c         cc          aaa   u 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

1: 5655172-5655254 [-]

Mature tni-miR-218a

• Accession: MIMAT0002994
• Description: Tetraodon nigroviridis tni-miR-218a mature miRNA
• Sequence: 11 - UUGUGCUUGAUCUAACCAUGUG - 32
• Evidence: not_experimental

References