Stem-loop tni-mir-21

Accession

MI0003326

Description

Tetraodon nigroviridis tni-mir-21 precursor miRNA

Gene family

MIPF0000060; mir-21

Sequence

auugucgucuuuacaucugucacucucggccugucaaaUAGCUUAUCAGACUGGUGUUGGCuguuaagauugcaaggcgacaacagucugaaggcugucugacauuucgggcucuuucaucu
........................(((((..(((((.(((((((.((((((((.(((((.((((.......)).)).))))).))))))))))))))).)))))..)))))...........

Structure

auugucgucuuuacaucugucacu     cc     a       A        G     G  -  ua 
                        cucgg  uguca aUAGCUU UCAGACUG UGUUG Cu gu  a
                        |||||  ||||| ||||||| |||||||| ||||| || ||  g
                        gggcu  acagu ugucgga agucugac acagc ga cg  a
-------------ucuacuuucuc     uu     c       -        a     g  a  uu 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

7: 1044906-1045027 [-]

Mature tni-miR-21

• Accession: MIMAT0003000
• Description: Tetraodon nigroviridis tni-miR-21 mature miRNA
• Sequence: 39 - UAGCUUAUCAGACUGGUGUUGGC - 61
• Evidence: not_experimental

References