miRBase entry: fru-mir-338

Stem-loop fru-mir-338


Accession
MI0003335
Description
Fugu rubripes fru-mir-338 precursor miRNA
Gene family
MIPF0000097; mir-338


Sequence

ggauucucccugcaacaacauccuggugcugccugagucacuuucacaaacUCCAGCAUCAGUGAUUUUGUUGcgggggg
.....(((((((((((((.((((((((((((...((((...........))))))))))))).))).)))))))))))))

Structure
ggauu             c   -         ccu    cacu 
     cucccugcaacaa auc cuggugcug   gagu    u
     ||||||||||||| ||| |||||||||   ||||    u
     ggggggcGUUGUU UAG GACUACGAC   CUca    c
-----             U   U         ---    aaca 


Annotation confidence Not enough data
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Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context
HE602539.1: 7711117-7711196 [+]

Database links

Mature fru-miR-338

Accession MIMAT0003007
Description Fugu rubripes fru-miR-338 mature miRNA
Sequence 52 - UCCAGCAUCAGUGAUUUUGUUG - 73
Evidence not_experimental

References