miRBase entry: fru-mir-199-1

Stem-loop fru-mir-199-1


Accession
MI0003358
Description
Fugu rubripes fru-mir-199-1 precursor miRNA
Gene family
MIPF0000040; mir-199


Sequence

uccugcuccgucauCCCAGUGUUCAGACUACCUGUUCaggauuuuacugguguacaguagucugcacauugguuagacagugcaugg
.(((((.(.(((...(((((((.((((((((.(((((((.......))))...))))))))))).)))))))...))).).))).))

Structure
u  -   u c   auC       U        C   ---    ga 
 cc ugc c guc   CCAGUGU CAGACUAC UGU   UCag  u
 || ||| | |||   ||||||| |||||||| |||   ||||  u
 gg acg g cag   gguuaca gucugaug aca   gguc  u
-  u   u a   auu       c        -   ugu    au 


Annotation confidence Not enough data
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Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context
HE602554.1: 3508828-3508914 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from fru-mir-199-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature fru-miR-199

Accession MIMAT0002959
Description Fugu rubripes fru-miR-199 mature miRNA
Sequence 15 - CCCAGUGUUCAGACUACCUGUUC - 37
Evidence not_experimental

References