Stem-loop tni-mir-107

Accession

MI0003380

Description

Tetraodon nigroviridis tni-mir-107 precursor miRNA

Gene family

MIPF0000024; mir-103

Sequence

ucugucugcugugagcuucuuuacaguguugccuuguggcauggcgaucaAGCAGCAUUGUACAGGGCUAUCAccgcacacagagcugc
(((((.(((.(((((((.((.(((((((((((.((((.((...)).).)))))))))))))).)))))..)))).))).))))).....

Structure

-----     c   u    --   u  u           c   - g  a 
     ucugu ugc guga  gcu cu uacaguguugc uug u gc  
     ||||| ||| ||||  ||| || ||||||||||| ||| | || u
     agaca acg cACU  CGG GA AUGUUACGACG Aac a cg  
cgucg     c   c    AU   -  C           -   u g  g 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

17: 10614411-10614499 [+]

Mature tni-miR-107

• Accession: MIMAT0003044
• Description: Tetraodon nigroviridis tni-miR-107 mature miRNA
• Sequence: 51 - AGCAGCAUUGUACAGGGCUAUCA - 73
• Evidence: not_experimental

References