Stem-loop fru-mir-212

Accession

MI0003383

Description

Fugu rubripes fru-mir-212 precursor miRNA

Gene family

MIPF0000065; mir-132

Sequence

ggucagcgcaucaacaccuuggcucuagacugcuuacugcuaaaaccgcucauaaguacagUAACAGUCUACAGUCAUGGCUacugacgccugac
.(((((.((.(((...((.(((((.(((((((.((((((...................))))))))))))).))))).))....))).)))))))

Structure

g     c  a   -aca  u     c       c      cuaaaacc 
 gucag gc uca    cc uggcu uagacug uuacug        g
 ||||| || |||    || ||||| ||||||| ||||||        c
 caguc cg agu    GG ACUGA AUCUGAC AAUgac        u
-     -  c   caUC  U     C       -      augaauac 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602545.1: 6389608-6389702 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-mir-212

Mature fru-miR-212

• Accession: MIMAT0003047
• Description: Fugu rubripes fru-miR-212 mature miRNA
• Sequence: 62 - UAACAGUCUACAGUCAUGGCU - 82
• Evidence: not_experimental

References